YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|165937015, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWIDYVIIG IIGFSALVSL IRGFVREALS LVTWGCAFFV ASHFYTYLAV YFTRFEDEIV  60
   61 RNGIAIGILF IATLIVGAIV NYVISSLVER TGLSGTDRVL GVCFGALRGV LIVSAMLFFL 120
  121 DTFTGFSQSV DWKQSQLIPQ FSYIIRWFFD YLQSTSSFLP NQLPIRSGL

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.83
Transmembrane Helix	6	25	0.90
Cytoplasmic	26	30	0.81
Transmembrane Helix	31	51	0.91
Non-Cytoplasmic	52	62	0.78
Transmembrane Helix	63	84	0.94
Cytoplasmic	85	98	0.82
Transmembrane Helix	99	120	0.88
Non-Cytoplasmic	121	169	0.80