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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|152959769, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRTIMLIPT GTSVGLTSVS LGVIRSMEQK GVSLSVFKPI AQPRAGNDAP DQTTTIIRAN  60
   61 SSITAAEPLN MNYVETLLSS NQQDVLMEEI VARYHENTKD AEVVLVEGLV PTRKHQFANA 120
  121 LNYEIAKTLN AEIVFVIALG NDSPDQLKER IELARSSFGG SKNKNITGVI INKLNAPVDE 180
  181 QGRTRPDLSE IFDDSTKASV ANIDPSQLFA NSPIPVLGCV PWSFELIATR AIDMAKHLNA 240
  241 RIINEGDIKT RRVKSVTFCA RSIPHMLEHF RPGSLLVTSA DRPDVLVSAC LAAMNGVEIG 300
  301 AILLTGGYAI DDRINNLCER AFQTGLPVFM VDTNTWQTSL SLQSFNLEVP ADDHERVEKL 360
  361 QNYVASHISS EWIDSLTAAS ERPRRLSPPA FRYELTELAR KAGKRIVLPE GDEPRTIKAA 420
  421 SICAERGIAT CVLLGNPEEI QRVATSQGVE LGKGVEIIDP VAVREQYVPR LVELRKSKGM 480
  481 TEVVAREQLE DNVVLGTLML EKGEVDGLVS GAVHTTANTI RPPLQLIKTA PGSSLVSSVF 540
  541 FMLLPDQVLV YGDCAINPDP TAEQLSEIAI QSADSAAAFG IEPRVAMISY STGNSGAGSD 600
  601 VEKVREATRL AQEKRPDLII DGPLQYDAAI MADVAKSKAP NSPVAGRATV FIFPDLNTGN 660
  661 TTYKAVQRSA DLISIGPMLQ GMRKPVNDLS RGALVDDIVY TVALTAIQSA QADSAAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle