YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16122387, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKDRKEMNQ IKTLAALTVA LAVCMPTANA GNWSLGASAL VSPDPYRGKN DRVYPVPVVS  60
   61 YESDNFYFRT LAAGYYLWND SSNRLSIDAF YSPLHFKPGD SDDQQMKQLN RRRSTMMAGM 120
  121 SYSHIEDWGT LRAMFAGDIL DNSDGFVGDL AYLYRFSIDS WTLTPGVGVS WSSKDQNSYY 180
  181 YGVSRGESAR SGLAEYNPSD SWSPYLELSA NYNINPNWNA FFTGRYIRLA NEVKNSPMVD 240
  241 QSYTGVLWTG VTYTFR

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	256	0.99