YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|153947326, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPLIFTEQ RLLPRWIDII ITALAWFGFV FLLVRGFLEM ISRAPHMGPI PLRIYILSGL  60
   61 TTIALYLAIA AFNAVVLIIW AKYNQVRFQV ERRGHRPDLD DDELASSMAL SPELIAQLKS 120
  121 GSCLTLYNDE HGHLLDVKEG LQLPEVAPVI HLRQG

Type	Start	End	Confidence
Cytoplasmic	1	15	0.77
Transmembrane Helix	16	38	0.89
Non-Cytoplasmic	39	55	0.74
Transmembrane Helix	56	81	0.86
Cytoplasmic	82	155	0.80