YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|165913394, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSIVRRRI VLGMVAVALA TGLNVKSYAA GDLLEQVKQR GTLIVGLEGT YPPFSFQGED  60
   61 GKLTGFEVDF ANALAEHMGV KAKITPTKWD GMLASLESKR IDVAINQVTI SDERKKKYDF 120
  121 STPYTVSGIQ VLTKKGNEGQ FTKPEDLQGK KVGVGLGSNY EQWLRENLKD VDIRTYDDDP 180
  181 TKYQDLRVGR TDAILVDRLA ALDLVKKTND ALAVAGPAFA RQESGVAMRK NNPELLAAVN 240
  241 NAIAEMQKDG TLAKISEKYF GADVTQ

Type	Start	End	Confidence
Signal Peptide	1	29	0.97
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	266	0.99