YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149289988, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSFLLIVV VVLIALFASL FVVEEGQRGI VLRFGKVLRD SDNKPLVYAP GLHFKIPFIE  60
   61 TVKRLDARIQ TMDNQADRFV TNEKKDLIVD SYLKWRISDF SRYYLATGGG DVSQAEVLLK 120
  121 RKFSDRLRSE IGRLNVRDIV TDSRGRLTSD VRDALNTGSV GDEAATTEAD DAIASAAARV 180
  181 EQETRGKQPA VNPNSMAALG IEVVDVRIKQ INLPAEVSDA IFQRMRAERE AVARRHRSQG 240
  241 QEEAEKLRAT ADYEVTRTLA EAERQARITR GGGDAEAARL FAEAFSQDPD FYAFIRSLRA 300
  301 YENSFSSGND VMVLSPDSDF FRYMKSPDNS SKRP

Type	Start	End	Confidence
Signal Peptide	1	26	0.85
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	334	0.99