YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221230941, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMTQSLCKK GGLGRGLASL IPTGPVDADS GPATYGPQMG NTAADVLIGG SAQKDNAMGA  60
   61 VYREIALSDI TENPCQPRQV FDDEAMSELV HSIREFGLLQ PIVVRPASGS CGDTRYQIVM 120
  121 GERRWRAAQQ AGLSFIPAIV RATGDDSMLR DALLENIHRV QLNPLEEAAA YQQLLDEFEV 180
  181 THDELASRIG RSRPLITNMI RLLKLPIPVQ RRVAAGVLSA GHARALLSLE ANPEVQEELA 240
  241 SRIIAEGLSV RATEEAVKLA NHEVNRVNRE VITPVPQRRK PICMPGLQDV AERLSNAFDT 300
  301 RVMVSLGKRK GKIVVEFSSV DDLQRIVDVM TTYKT

Type	Start	End	Confidence
Signal Peptide	1	28	0.82
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	335	0.99