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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|219933886, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGATMTTRG RKLRPGRITF VGAGPGAPGL LTAQAVAVLA NAALVFIDPD VPEPVLALIG  60
   61 KDLPPVSGPA PAGPAAVTAG RAADGTLEGD HYQAAPMVMS GGADIRPALG DPTEVAKTLT 120
  121 AEARSGVDVV RLVAGDPLTV DAVIAEVNAV ARTNLQIEIV PGLVTSSVVP TYAGLPLGSS 180
  181 HTVADVRGDV DWEALAAAPG PLILQATASH LADAAHILID HGLDDATPCV VTAQGTTCQQ 240
  241 RSVETTLEGL ADSAVLVGTD TAGPLTGPLV VTIGKTVTSR ARLNWWESRA LYGWTVLVPR 300
  301 TKDQAGEMSE RLTSYGALPV EVPTIAVEPP RSPAQMERAV KGLVDGRFQW VVFTSTNAVR 360
  361 AVWEKFGEFG LDARAFSGVK IACVGEATAD RVRAFGISPE LVPAGEQSSL GLLDEFPPYD 420
  421 SVFDPVNRVL LPRADIATET LAEGLRGCGW EIEDVTAYRT VRAAPPPAAT REMIKTGGFD 480
  481 AVCFTSSSTV RNLVGIAGKP HARTVIACIG PKTAETASEF GLRVDVQPET AAVGPLVDAL 540
  541 AEHVARLRAE GALPPPRKKS RRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle