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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|221230139, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKTKVLRSL VVAVVGKVTV TVETDVLVNP SDDVVEVVSR LIRFDTTNTG DPETTRGEAE  60
   61 CAQWVASQLA EVGYQPEYLE SGAPGRGNVF ARLAGEDSSR GALLIHGHLD VVPAETAEWS 120
  121 VHPFSGAVEG GQVWGRGAID MKDMVGMMIV VARQLKQAGI APPRDLVFAF VADEEHGGSY 180
  181 GSQWLVDNRP DLFDGVTEAI GEVGGFSLTV PCRNGGERRL YLIETAEKGM QWMRLTARGR 240
  241 AGHGSMVHNQ NAVTAVAEAV ARLGRHQFPL VTTDTVVQFL AAISEETGLE FDIGSPDLEG 300
  301 AIEKLGPMAR MLKAVLYDTA NPTVLKAGYK VNVVPATAEA MVDCRILPGR QAAFEAAIDE 360
  361 LIGPDVTREW IKDLPPYETA FDGDLVDAMN AAVLAVDPDG RTVPYMASGG TDAKAFARLG 420
  421 IRCFGFTPLR LPPELDFTAL FHGVDERVSI DALKFGIDVL AHFLTHC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle