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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15827547
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMATAPATR SCDFYCTIRR LLKQLVPQRR LSLTVITLGI TGTAIGIIVP WVLGHTTDLL  60
   61 FNGVIGRQLP KGISKTQAVA AARTRGDNAL ADLLSGMNLV PGQGVDFVAV GRTLGLALSL 120
  121 YLVYTLLTWA QARLLNVTVQ RIMFALRSDV EDKVHRLPLS YCDTRQRGEL LSRVTNDIDN 180
  181 LQSSLSITLS QLLTSLLTVV AVLVVMVSVS PLLALVALLT VPMSLLATRA IAQRSQQLFV 240
  241 AQWTSAGRLN AHIEETYSGL TVVKTFGHQT AAREQFRNVN NDVYQASFSA QFFSGLVSPA 300
  301 TMFISNLGYV VVAALGGLQV ATGHITLGNI QAFIQYVRQF NMPLSQVAGI YNTLQSGLAS 360
  361 AERVFDLLDE PEELPDPMLA LPPPHGQVPR INGRVEFQQV SFAYRTGTPV IDDLSMVVEP 420
  421 GSTVAIVGPT GAGKTTLVNL LMRFYDVDSG QILIDGVDIT TVSRHALRSR IGMVLQDAWL 480
  481 FDGTIAENIA YGRPQASEDE VMEAAKAAYV DRFVHTLSAG YQTRVSGDGD NISAGEKQLI 540
  541 TIARAFLARP QLLILDEATS SIDTRTEALI ARATHDLLQD RTSFIIAHHL PTIRDADHIL 600
  601 VVAAGKIVEQ GSHAKLLARR GAYYRMTQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle