YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25374106, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEAKRLDPK RRSPASRPGK AGDSVRGRRS TKPVAKLSVK PSRTTPASSH SGRNSTRMLT  60
   61 QHVVEPIRQS IIESRERRSD QQLGFTARRA AVLAAVVCVL TLTIAGPVRT YFAQHAEIEQ 120
  121 LAATEATLRR QIADLEQQKG KLADSAYIAA RARERLGFVM PGDVPFQVQL PSTAAVSSQP 180
  181 GGRAAKPANN DPWYTSLWHN IADAPHLPPG AGTPPFSLTP LSTTSGG

Type	Start	End	Confidence
Cytoplasmic	1	84	0.79
Transmembrane Helix	85	106	0.75
Non-Cytoplasmic	107	227	0.93