YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194696770, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKGCLKRL QKEYHALCKE PPPQIVARPL PNDILEWHYV LEGSKGTPFE GGYYYGKLKF  60
   61 PPDYPFKPPS ISMTTPSGRF APHKRICLSM SDFHPESWNP MWSVASILTG LLSFMMDDAL 120
  121 TTGSIKTSDA EKRRLAKASL AYNCESKNCP HFRKLFPEYV EKYNQQQQLE NTAAEPVPQE 180
  181 NPAPVPSLAV QQAPVVANRA QPLAEVRRDK NQKKAVPFWM VLVMFSVFGA VMALPLMQL

Type	Start	End	Confidence
Cytoplasmic	1	215	0.83
Transmembrane Helix	216	237	0.93
Non-Cytoplasmic	238	239	0.90