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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|189356110, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARTKLKFRL HRAVIVLFCL ALLVALMQGA SWFSQNHQRQ RNPQLEELAR TLARQVTLNV  60
   61 APLMRTDSPD EKRIQAILDQ LTDESRILDA GVYDEQGDLI ARSGESVEVR DRLALDGKKA 120
  121 GGYFNQQIVE PIAGKNGPLG YLRLTLDTHT LATEAQQVDN TTNILRLMLL LSLAIGVVLT 180
  181 RTLLQGKRTR WQQSPFLLTA SKPVPEEEES EKKECPITTR KEIVMSTLRL LISDSYDPWF 240
  241 NLAVEECIFR QMPATQRVLF LWRNADTVVI GRAQNPWKEC NTRRMEEDNV RLARRSSGGG 300
  301 AVFHDLGNTC FTFMAGKPEY DKTISTSIVL NALNALGVSA EASGRNDLVV KTAEGDRKVS 360
  361 GSAYRETKDR GFHHGTLLLN ADLSRLANYL NPDKKKLAAK GITSVRSRVT NLTELLPGIP 420
  421 HEQVCEAITE AFFAHYGERV EAEIISPDKT PDLPNFAETF ARQSSWEWNF GQAPAFSHLL 480
  481 DERFSWGGVE LHFDVEKGHI TRAQVFTDSL NPAPLEALAG RLQGCLYRAD MLQQECEALL 540
  541 VDFPDQEKEL RELSTWIAGA VR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle