YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12519132, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFVFSAIVT KVIVEIPPPP GKISVQPSAL QDDLQTRLFT GDGPNSPEPD MSWIILVIAG  60
   61 LLEVVWAVGL KYTHGFSRLT PSVITVTAMI VSMALLAWAM KSLPVGTAYA VWTGIGAVGA 120
  121 AITGIVLLGE SANPMRLASL ALIVLGIIGL KLSTH

Type	Start	End	Confidence
Non-Cytoplasmic	1	50	0.57
Transmembrane Helix	51	70	0.92
Cytoplasmic	71	78	0.49
Transmembrane Helix	79	100	0.91
Non-Cytoplasmic	101	107	0.50
Transmembrane Helix	108	128	0.95
Cytoplasmic	129	134	0.50
Transmembrane Helix	135	154	0.83
Non-Cytoplasmic	155	155	0.53