YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15804418, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSFLKRTQC AQLRSTPSLI FSTGITHPAE TALQRFKFLM YQVVASDLDG TLLSPDHTLS  60
   61 PYAKEPLKLL TARGINFVFA TGRHHVDVGQ IRDNLEIKSY MITSNGARVH DLDGNLIFAH 120
  121 NLDRDIASDL FGVVNDNPDI ITNVYRDDEW FMNRHRPEEM RFFKEAVFKY ALYEPGLLEP 180
  181 EGVSKVFFTC DSHEQLLPLE QAINARWGDR VNVSFSTLTC LEVMAGGVSK GHALEAVAKK 240
  241 LGYSLKDCIA FGDGMNDAEM LSMAGKGCIM GSAHQRLKDL HPELEVIGTN ADDAVPHYLR 300
  301 KLYLS

Type	Start	End	Confidence
Signal Peptide	1	31	0.86
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	305	0.99