YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15803434, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTPFPPRQ PTASARLPLT LMTLDDWALA TITGADSEKY LQGQVTADVS QMTDDQHLLA  60
   61 AHCDAKGKMW SNLRLFRDGD GFAWIERRSV REPQLAELKK YAVFSKVTIA PDDERVLLGV 120
  121 AGFQARAALA NIFSELPSKE KQVVKEGATT LLWFEHPAER FLIVTDEATA NMLTDKLRGE 180
  181 AELNNSQQWL ALNIEAGFPV IDAANSGQFI PQATNLQALG GISFKKGCYT GQEMVARAKF 240
  241 RGANKRALWL LTGSASRLPE AGEDLELKMG ENWRRTGTVL AAVKLEDGQV VVQVVMNNDM 300
  301 EPDSIFRVRD DANTLCIEPL PYSLEE

Type	Start	End	Confidence
Signal Peptide	1	30	0.51
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	326	0.99