YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254794689, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNSHNITLT NNDSLTEDEE TTWSLPGAVV GFISWLFALA MPMLIYGSNT LFFFIYTWPF  60
   61 FLALMPVAVV VGIALHSLMD GKLRYSIVFT LMTVGIMFGA LFMWLLG

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	45	0.85
Non-Cytoplasmic	46	53	0.77
Transmembrane Helix	54	76	0.91
Cytoplasmic	77	84	0.78
Transmembrane Helix	85	106	0.92
Non-Cytoplasmic	107	107	0.95