YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25340138
Protein type:	Globular with Signal Peptide
Type Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANWLNQXQS LLGQSSSSTS SSADQGLGKL LVPGALGGLA GLLVANKSAR KLLTKYGTNA  60
   61 LLIGGGAVAG TVLWNKYKDK IRAAHQDEPQ FGSQSTPLDE RTERLILALV FAAKSDGHID 120
  121 AKERAAIDQQ LREAGVEEQG RVLIEQAIEQ PLDPQRLATG VRNEEEALEI YFLSCAAIDI 180
  181 DHFMERSYLN ALGDALKIPQ DVREGIERDL EQQKRTLAE

Type	Start	End	Confidence
Signal Peptide	1	23	0.35
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	219	0.60