YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|195938994
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKNTLLAS ALLSATAFSV NAATELTPEQ AAAVKPFDRV VVTGRFNAIG EAVKAVSRRA  60
   61 DKEGAASFYV VDTSDFGNSG NWRVVADLYK ADAEKAEETS NRVINGVVEL PKDQAVLIEP 120
  121 FDTVTVQGFY RSQPEVNDAI TKAAKAKGAY SFYIVRQIDA NQGGNQRITA FIYKKDAKKR 180
  181 IVQSPDVIPA DSEAGRAALA AGGEAAKKVE IPGVATTASP SSEVGRFFET QSSKGGRYTV 240
  241 TLPDGTKVEE LNKATAAMMV PFDSIKFSGN YGNMTEVSYQ VAKRAAKKGA KYYHITRQWQ 300
  301 ERGNNLTVSA DLYK

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	314	0.99