YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|189375881, gi...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSRTQIVN WLTRCGDIFN TESEYLTGLD REIGDADHGL NMNRGFSKVV EKLPAIADKD  60
   61 IGFILKNTGM TLLSCVGGAS GPLFGTFFIR AAQATQARQS LTLEELYQMF RDGADGVISR 120
  121 GKAEPGDKTM CDVWVPVVES LRQSSEQNLS VPAALEAASS IAEFAAQSTI TMQARKGRAS 180
  181 YLGERSIGHQ DPGATSVMFM MQMLALAAKE

Type	Start	End	Confidence
Cytoplasmic	1	68	0.60
Transmembrane Helix	69	89	0.64
Non-Cytoplasmic	90	210	0.87