YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|209397090, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPYIYLGGA ILAEVIGTTL MKFSEGFTRL WPSVGTIICY CASFWLLAQT LAYIPTGIAY  60
   61 AIWSGVGIVL ISLLSWGFFG QRLDLPAVIG MMLICAGVLV INLLSRSTPH

Type	Start	End	Confidence
Cytoplasmic	1	29	0.54
Transmembrane Helix	30	49	0.92
Non-Cytoplasmic	50	57	0.52
Transmembrane Helix	58	79	0.92
Cytoplasmic	80	84	0.65
Transmembrane Helix	85	105	0.91
Non-Cytoplasmic	106	110	0.60