YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73855096, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFTNTPERY GVISAAFHWL SAIIVYGMFA LGLWMVTLSY YDGWYHKAPE LHKSIGILLM  60
   61 MGLVIRVLWR VISPPPGPLP SYSPMTRLAA KAGHLALYLL LFAIGISGYL ISTADGKPIS 120
  121 VFGWFDVPAT LADAGAQADF AGALHFWLAW SVVVLSVMHG FMALKHHFID KDDTLKRMLG 180
  181 KSSSDYGV

Type	Start	End	Confidence
Cytoplasmic	1	15	0.85
Transmembrane Helix	16	38	0.88
Non-Cytoplasmic	39	50	0.88
Transmembrane Helix	51	72	0.88
Cytoplasmic	73	92	0.88
Transmembrane Helix	93	114	0.91
Non-Cytoplasmic	115	145	0.87
Transmembrane Helix	146	168	0.84
Cytoplasmic	169	188	0.98