YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25500156, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIIFGEKCV SLLRLFFAAV LMLWCAQTAA YSGQCHTTQG NPYIGVNFGV KTLEEEENTT  60
   61 GVVKDKFYQW NESNDYYVSC DCDKDNVRSG RWAFAADSPL VYLGDNWYKI NDYLAAKVLL 120
  121 QVKGSSPTAV PFENVGTGAD TRWHICDPGG QRLGGQGASG NSGSFSLKIL QPFVGSVVIP 180
  181 PMALARLFEC YNIPAGDSCT TTGTPVLVYY LSGTINSLGS CSVNAGETIE VDLGDVFAAN 240
  241 FRVVGHKPLG ARTAELAIPV RCNTGNAGLV NVNLSLTATT DPSYPQAIKT SRPGVGVVVT 300
  301 DSQNNIISPA GGTLPLSIPD DADSIA

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	326	0.99