YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|195939646
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTCITKGIV TVSLTAILLS CSSTWAAGKG GVGLAATRLV YSEGEEQISL GVRNTSPDVP  60
   61 YLIQSWVMTP DNKKSADFII TPPLFVLNPA NENLLRIMYI GAPLAKDRET LFFTSVRAVP 120
  121 STTKREEGNT LKIATQSVIK LFWRPKGLAY PLGEAPAKLR CTSSADMVTV SNPTPYFITL 180
  181 TDLKIGGKLV KNQMISPFDK YQFSLPKGAK NSSVTYRTIN DYGAETPQLN CKS

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	233	0.99