YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12513881, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQTRPIIIR LTDGSSIMKK LVLAALLASC AFGASAAEKI NFGVSATYPP FESMDANNQI  60
   61 VGFDIDLAKA LCKQMQAECT FTNHAFDSLI PSLKFRKYDA VISGMDITPD RSKQVSFTTP 120
  121 YYENSAVVIA KKDTYKTFAD LKGKRIGMEN GTTHQKYIQD QHPEVKTVSY DSYQNAFIDL 180
  181 KNSRIDGVFG DTAVVNEWLK TNPQLGVATE KVTDPQYFGT GLGIAVRPDN KALLEKLNNA 240
  241 LAAIKADGTY QQISDQWFPQ

Type	Start	End	Confidence
Signal Peptide	1	36	0.99
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	260	0.99