YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55742529, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYLGYFLFL FCGLTRVMAS YPIWWSLAVG HQYTSLGTQP IMCSSIPGLV PKQLRFCRNY  60
   61 VEIMPSVAEG VKIGIQECQH QFRGRRWNCT TINDKLAIFG PVLDKEKERK IGFKQAKATR 120
  121 ESAFVHAIAS AGVAFXVTRA CTEGSATICG CDSRRKGPPG EGWKWGGCSE DVEFGSMVSR 180
  181 EFADARENRP DARSAMNRHN NEAGRSSITD HMYLKCKCHG LSGSCEVKTC WWSQPDFRVI 240
  241 GDYMKDKYDS ASEMVVEKHR ESRGWVETLR PKYPYYKPPT ETDLVYYESS PNFCEPNPET 300
  301 GSFGTRDRTC NLTSHGIDGC DLLCCGRGHN TRTEKRKEKC HCIFHWCCYV SCQECTRVYD 360
  361 VHTCK

Type	Start	End	Confidence
Signal Peptide	1	19	0.93
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	365	0.99