YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55742519, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPAGAPAP EGGNQAPPNL TSNRRLQQTQ AQVDEVVDIM RVNVDKVLER DQKLSELDDR  60
   61 ADALQAGASQ FETSAAKLKN KYWWKNAKMM IILGVICVIV LIIIIVYFST

Type	Start	End	Confidence
Cytoplasmic	1	88	0.98
Transmembrane Helix	89	108	0.96
Non-Cytoplasmic	109	110	0.84