YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68440537, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSMATEIVA FLLTISGWIL VSSTLPTDYW KVSSVDGTVI TTATFWSNLW KTCVTDSTGV  60
   61 SNCKDFPSML ALDAYIQVCR GLMISAVCLG FFGASLALVG MKCTRIGGSE TTKARITCLC 120
  121 GLHFILSGIC SITACSLYAH RITSEFFDPL FVKQKFELGA ALFIGWAGSV LSILGGLIFC 180
  181 FSMTEGFSIR EYSYNGATSV ISTRTKITKT NKSTKSQKDP SDQMFSGRRF GRNAYV

Type	Start	End	Confidence
Cytoplasmic	1	7	0.90
Transmembrane Helix	8	27	0.92
Non-Cytoplasmic	28	77	0.94
Transmembrane Helix	78	100	0.91
Cytoplasmic	101	118	0.88
Transmembrane Helix	119	140	0.95
Non-Cytoplasmic	141	159	0.90
Transmembrane Helix	160	181	0.94
Cytoplasmic	182	236	0.97