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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VEZA_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPEFDEEVV FENSPLYQYL QDLGHTDFEI CSSLSPKTET CLTTEEPQTP PTRVLQKQGI  60
   61 LLKLTETIKS WTLSSQYSKK DDLLHKLDTG FRLDALDAIL QQEVLLQEDV ELIELLDPSI 120
  121 LSAGHPQQEN GHLPTLCSLA TPNIWDVSML FAFISLLIML PTWWIVSSWL VWGIILFLYL 180
  181 IIRVLKFWRT AKLQMTLKKY RVRLEDMAAN SRAFTNLVRK SLRLIQETEV ISRGFTLLLD 240
  241 RVSAACSFNK AAQHPSQHLI GLRKAVYRTV RANFQAARLA TLYMLKNYPL NSESDNVTNY 300
  301 ICVVPFKELG LGLSEDQISE EEARNLTDGF SLPALKVLFQ LWVAQSSEFF RRLALLLSTA 360
  361 NSPSGPLLTA ALLPHRILSD VTQGLPHAHT ACLDELKRSY EFFRYFETQH QSVPQRLPKT 420
  421 QPKWRELNNV HTAVRSLQLH LKALLNEVII LEDELEKLVC TKETQELLSE AYPVLEQRLK 480
  481 LIEPHVQASN SCWEEAISQV DRLLRRNTDQ KGKPGVACEN PHCTAAPLLR PTLHIEDRDP 540
  541 IPEEQELEAY VDGIDIESEF RKDSLYHVSQ EDRERQKREQ EESKRVLQEL KSVLGFKASE 600
  601 AERQKWKQLL FSDHAVLKSL SPVEPVESVS NSETPMNSDT EQAHSEATEE ETSKPCASDK 660
  661 EDTRTEYMCD GPPKGQSKDT SGDQGHLLQG AHQCESEAKP PQAAAAGATA PPTPRDSPRL 720
  721 SIKQRLARLQ LSPEYTFTAG LAAEVAARSL SFTTMQEQTF GDEEDEDKEQ LVEGGERELE 780
  781 EK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle