YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34898442, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILYAVVAR GTVVLAEHSA AATNAGAVAR QVLERLPGGG ADSHVSYTQD RYVFHAKRTD  60
   61 GITALCMADE AAGRRIPFAF LEDIHGRFVK TYGRAALTSL AYGMNDEFSR VLSQQMDYYS 120
  121 NDPNADRINR MRGEISQVRT VMIDNIDKVL ERGDRLDMLV DKTANMQGNT IRFKRQARRF 180
  181 RNTTWWRNVK LTIALIFLLT VIIYVVLVFM CHGFTLPTCI R

Type	Start	End	Confidence
Cytoplasmic	1	187	0.75
Transmembrane Helix	188	214	0.81
Non-Cytoplasmic	215	221	0.69