YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55584976
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKADVVIVG AGHGGAQCAI ALRQNGFEGT ITVIGREPEY PYERPPLSKE YFAREKTFDR  60
   61 LYIRPPTFWA EKNIEFKLGT EVTKVDPKAH ELTLSNGESY GYGKLVWATG GDPRRLSCQG 120
  121 ADLTGIHAVR TREDCDTLMA EVDAGTKNIV VIGGGYIGLE AAAVLSKMGL KVTLLEALPR 180
  181 VLARVAGEDL STFYQKEHVD HGVDLRTEVM VDSLVGENGK VTGVQLAGGE VIPAEGVIVG 240
  241 IGIVPAVGPL IAAGAAGANG VDVDEYCRTS LPDIYAIGDC AAFACDYAGG NVMRVESVQN 300
  301 ANDMGTCVAK AICGDEKPYK AFPWFWSNQY DLKLQTAGIN LGFDKTVIRG NPEERSFSVV 360
  361 YLKDGRVVAL DCVNMVKDYV QGRKLVEAGA TPDLEALADA GKPLKELL

Type	Start	End	Confidence
Signal Peptide	1	18	0.65
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	408	0.99