YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lcl\|NC_016856.1_...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSVIAIII IVLVVLYMSV FVVKEGERGI TLRFGKVLRD DENKPLVYAP GLHFKIPFIE  60
   61 SVKMLDARIQ TMDNQADRFV TKEKKDLIVD SYIKWRISDF SRYYLATGGG DISQAEVLLK 120
  121 RKFSDRLRSE IGRLDVKDIV TDSRGRLTLE VRDALNSGSA GTDDEVATPA ADDAIAEAAE 180
  181 RVTAETKGKV PVINPNSMAA LGIEVVDVRI KQINLPTEVS EAIYNRMRAE REAVARRHRS 240
  241 QGQEEAEKLR AAADYEVTKT LAEAERQGRI MRGEGDAEAA KLFADAFSQD PDFYAFIRSL 300
  301 RAYEKSFEGN QDVMVLSPDS DFFRYMKTPS STTR

Type	Start	End	Confidence
Signal Peptide	1	22	0.62
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	334	0.94