YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16762820
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKHPVIAV TGSSGAGTTT TSLAFRKIFA QLNLHAAEVE GDSFHRYTRP EMDMAIRKAR  60
   61 DAGRHISYFG PEANDFSLLE HTFIEYGQTG KGQSRKYLHT YDEAVPWNQV PGTFTPWQPL 120
  121 PEPTDVLFYE GLHGGVVTPQ HDVARHVDLL VGVVPIVNLE WIQKLIRDTS ERGHSREAVM 180
  181 DSVVRSMDDY INYITPQFSR THINFQRVPT VDTSNPFAAK GIPSLDESFV VIHFRNLEGI 240
  241 DFPWLLAMLQ GSFISHINTL VVPGGKMGLA MELIMLPLVQ RLMEGKKIE

Type	Start	End	Confidence
Signal Peptide	1	24	0.90
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	289	0.94