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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|205330821, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQHTQTPSM PSPLWQYWRG LSGWNFYFLV KFGLLWAGYL NFHPLLNLVF MAFLLMPIPK  60
   61 YRLHRLRHWI AIPVGFALFW HDTWLPGPQS IMSQGTQVAE FSSGYLLDLI ARFINWQMIG 120
  121 AIFVLLVAWL FLSQWIRVTV FVVAIMVWLN VLTLTGPVFT LWPAGQPTDT VTTTGGNAAA 180
  181 TVATAGDKPV IGDMPAQTAP PTTANLNAWL NTFYAAEEKR KTTFPAQLPP DAQPFDLLVI 240
  241 NICSLSWSDV EAAGLMSHPL WSHFDILFKH FNSGTSYSGP AAIRLLRASC GQPSHTRLYQ 300
  301 PANNECYLFD NLAKLGFTQH LMMDHNGEFG GFLKEVRENG GMQSELMNQS GLPTALLSFD 360
  361 GSPVYDDLAV LNRWLTGEER EANSRSATFF NLLPLHDGNH FPGVSKTADY KIRAQKLFDE 420
  421 LDAFFTELEK SGRKVMVVVV PEHGGALKGD RMQISGLRDI PSPSITNVPA GVKFFGMKAP 480
  481 HEGAPIDINQ PSSYLAISEL VVRAVDGKLF TEDSVNWNKL TSNLPQTAPV SENANAVVIQ 540
  541 YQGKPYVRLN GGDWVPYPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle