YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29139771, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILTPMRRYG AMILMLLTIA FSGEVLAKTR ATQTSQKSHI TETSYKQVSS KQEYSRNSAK  60
   61 SSSLPDLRKY PSGTPRKKAF LRTVMPYITS QNAAITADRN WLISKQYQNR WSPSERARMK 120
  121 DIAKRYKVSW SGNTRRIPWN TLLERVDIIP TSMVATMAAA ESGWGTSKLA RSNNNLFGMK 180
  181 CTKGRCTNTP GKVKGYSQFA SVEESVSAYV ANLNTHPAYS SFRKSRAQLR KADQEVTATA 240
  241 MIHKLKGYST QGARYNNYLF AMYQDNQRLI AAHM

Type	Start	End	Confidence
Signal Peptide	1	27	0.97
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	274	0.99