YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29139332, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRILVTGGA GFIGSAVVRH IIHETADAVV VVDKLTYAGN LMSLASVAQS DRFAFEKVDI  60
   61 CDRASLEQVF QQYQPDSVMH LAAESHVDRS IDGPAAFIET NIVGTYTLLE AARAYWSALD 120
  121 ADAKAAFRFH HISTDEVYGD LHTADDFFTE TTPYAPSSPY SASKASSDHL VRAWLRTYGL 180
  181 PTLVTNCSNN YGPYHFPEKL IPLMILNALA GKPLPVYGNG QQIRDWLYVE DHARALYHVV 240
  241 TNGAVGETYN IGGHNERKNL DVVRTICALL EELAPQKPQG VANYHDLITF VDDRPGHDLR 300
  301 YAIDASKIAR ELGWTPQETF ESGMRKTVQW YLANEAWWKP VQDGSYQGER LGLKR

Type	Start	End	Confidence
Signal Peptide	1	16	0.74
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	355	0.99