YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|167993956, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVASYRSQGR WVIWLSFLIA LLLQIMPWPD DIIVFRPNWV LLILLYWILA LPHRVNVGTG  60
   61 FVMGAILDLI SGSTLGVRAL SMSIVAYLVA LKFQLFRNLA LWQQALVVML LSLAVDIIVF 120
  121 WAEFLVINVS FRPEVFWSSV VNGVLWPWLF LLMRKVRQQF AVQ

Type	Start	End	Confidence
Cytoplasmic	1	9	0.61
Transmembrane Helix	10	28	0.91
Non-Cytoplasmic	29	64	0.40
Transmembrane Helix	65	91	0.71
Cytoplasmic	92	99	0.62
Transmembrane Helix	100	125	0.82
Non-Cytoplasmic	126	134	0.59
Transmembrane Helix	135	152	0.93
Cytoplasmic	153	163	0.70