YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|195633422, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMRLNENLD DNGEMHEINV TPFIDVMLVL LIIFMVAAPL ATVDVKVNLP ASTSTPQPRP  60
   61 EKPVYLSVKA DNTMFIGNDP VTDDTMIAEL TALTEGKKDT TIFFRADKTV EYETLMKVMD 120
  121 MLHQAGYLKI GLVGEETAKA K

Type	Start	End	Confidence
Cytoplasmic	1	20	0.59
Transmembrane Helix	21	43	0.85
Non-Cytoplasmic	44	141	0.66