YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16761829
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFISFPPRH PSSSARLPLT LIALDDWALS SITGVDSEKY IQGQVTADVS QMTEQQHLLA  60
   61 AHCDAKGKMW STLRLFRERD GFAWIERRSV REAQLTELKK YAVFSKVVIA PDDERVLLGV 120
  121 AGFQARAALA NVFSELPNSE NQVVRDGAST LLWFEHPAER FLLVTDVATA NMLTEKLHGE 180
  181 AELNNSQQWL ALDIEAGIPV IDAANSGQFI PQATNLQALG GISFKKGCYT GQEMVARAKF 240
  241 RGANKRALWL LAGKASRVPE AGEDLELQMG ENWRRTGAIL AATQLDDGQL LVQAVMNNDL 300
  301 EAESVFRVRD DANTLHIVPL PYSLEE

Type	Start	End	Confidence
Signal Peptide	1	30	0.67
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	326	0.99