YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29143188, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGMVKVTGF NMRNSHNITF TRSDAFMVDD DATSAFPGAV VGFVSWLLAL GIPFLLYGPN  60
   61 TLFFFLYTWP FFLALMPVSV IIGIALHLLV KGKILFSIMF TLLAVGALFG ALFIWLLG

Type	Start	End	Confidence
Cytoplasmic	1	34	0.88
Transmembrane Helix	35	57	0.90
Non-Cytoplasmic	58	65	0.75
Transmembrane Helix	66	89	0.88
Cytoplasmic	90	94	0.78
Transmembrane Helix	95	117	0.92
Non-Cytoplasmic	118	118	0.91