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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56412765, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRIIMLIPT GTSVGLTSVS LGVIRAMERK GVRLSVFKPI AQPRAGGDAP DQTTTIVRAN  60
   61 STLPAAEPLK MSHVESLLSS NQKDVLMEEI IANYHANTKD AEVVLVEGLV PTRKHQFAQS 120
  121 LNYEIAKTLN AEIVFVMSQG TDTPEQLNER IELTRSSFGG AKNTNITGVI INKLNAPVDE 180
  181 QGRTRPDLSE IFDDSSKAQV IKIDPAKLQE SSPLPVLGAV PWSFDLIATR AIDMARHLNA 240
  241 TIINEGDIKT RRVKSVTFCA RSIPHMLEHF RAGSLLVTSA DRPDVLVAAC LAAMNGVEIG 300
  301 ALLLTGGYEM DARISKLCER AFATGLPVFM VNTNTWQTSL SLQSFNLEVP VDDHERIEKV 360
  361 QEYVANYVNA DWIESLTATS ERSRRLSPPA FRYQLTELAR KAGKRVVLPE GDEPRTVKAA 420
  421 AICAERGIAT CVLLGNPDEI NRVAASQGVE LGAGIEIVDP EVVRESYVAR LVELRKSKGM 480
  481 TEPVAREQLE DNVVLGTLML EQDEVDGLVS GAVHTTANTI RPPLQLIKTA PGSSLVSSVF 540
  541 FMLLPEQVYV YGDCAINPDP TAEQLAEIAI QSADSAIAFG IEPRVAMLSY STGTSGAGSD 600
  601 VEKVREATRL AQEKRPDLMI DGPLQYDAAV MADVAKSKAP NSPVAGRATV FIFPDLNTGN 660
  661 TTYKAVQRSA DLISIGPMLQ GMRKPVNDLS RGALVDDIVY TIALTAIQAS QQQQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle