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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25304719, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATASTATQ PKPLEWLNRL RANPRIPLIV AGSTAVAIVV AMVLWAKTPD YRTLFSNLSD  60
   61 QDGGAIVAQL TQMNIPYRFA NGSGAIEVPA DKVHELRLRL AQQGLPKGGA VGFELLDQEK 120
  121 FGISQFSEQV NYQRALEGEL ARTIETLGPV KSARVHLAMP KPSLFVREQK SPSASVTVTL 180
  181 EPGRALDEGQ ISAVVHLVSS AVAGLPPGNV TLVDQSGHLL TQSNTSGRDL NDAQLKFAND 240
  241 VESRIQRRIE AILSPIVGNG NVHAQVTAQL DFANKEQTEE HYSPNGDASK ATLRSRQLNI 300
  301 SEQVGAGYPG GVPGALSNQP APPNEAPIAT PPTNQQNAQN TPQTSTSTNS NNAGPRNTQR 360
  361 NETSNYEVDR TIRHTKMNVG DIERLSVAVV VNYKTLADGK PLPLTADQMK QIEDLTREAM 420
  421 GFSDKRGDTL NVVNSPFSAV DNTGGELPFW QQQSFIDQLL AAGRWLLVLV VAWILWRKAV 480
  481 HPQLTRRVEE AKAAQEQAQV RQETEEAVEV RLSKDEQLQQ RRANQRLGAE VMSQRIREMS 540
  541 DNDPRVVALV IRQWMSNDHE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle