YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|205352577, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALNSKVKK AVIPVAGLGT RMLPATKAIP KEMLPLVDKP LIQYVVNECI AAGITEIVLV  60
   61 THSSKNSIEN HFDTSFELEA MLEKRVKRQL LEEVQSICPP HVTIMQVRQG LAKGLGHAVL 120
  121 CAHPVVGNEP VAVILPDVIL DEYESDLSQD NLAEMIRRFD ETGNSQIMVE PVEDVTAYGV 180
  181 VDCKGVELAP GESVPMVGVV EKPKADVAPS NLAIVGRYVL SADIWALLAK TPPGAGDEIQ 240
  241 LTDAIDMLIE KETVEAYHMK GKSHDCGNKL GYMQAFVEYG IRHNSLGAEF KAWLEEEMGI 300
  301 KK

Type	Start	End	Confidence
Signal Peptide	1	28	0.59
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	302	0.99