YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|213979860
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAGATCCFV SRLGHRQHAK ERHEKVFFAA ALVVSGLLVG CNQLTQYTIS EQEINQALEK  60
   61 RNNFSKDIGL PGIADAHIVL TNLASQIGRE EPNKVTLTGD ARLDMNSLFG SQKATMKLKL 120
  121 KALPVFDKEK GAIYLQEMEV VDATVTPEKM QSVLQTLLPY LNQSLRSYFN QRPAYVLRED 180
  181 SSKGEALAKK LAKGIEVKPG EIVIPFTN

Type	Start	End	Confidence
Cytoplasmic	1	25	0.66
Transmembrane Helix	26	44	0.66
Non-Cytoplasmic	45	208	0.98