YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|195630902, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVLIAALI AGFSLSATAA QTIRFATEAS YPPFESMDAN NKIVGFDVDL ANALCKEIDA  60
   61 SCTFTNQAFD SLIPSLKFRR FDAVMAGMDI TPEREKQVLF TTPYYDNSAL FVGQQGKYTS 120
  121 VDQLKGKKVG VQNGTTHQKF IMDKHPEITT VPYDSYQNAK LDLQNGRIDA VFGDTAVVTE 180
  181 WLKANPKLAP VGDKVTDKDY FGTGLGIAVR QGNTELQQKF NTALEKVKKD GTYETIYNKW 240
  241 FQK

Type	Start	End	Confidence
Signal Peptide	1	20	0.97
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	243	0.99