YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62179381, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWQQRVRVA TGLGCWQIML HLLVVAMLVI GWMSGTLVRV GLGLCVLYGV TVLLMLALQR  60
   61 HHEQRWRDVA DVLEELTTTW YFGTALIVLW LLSRVLQNNV LLALAGLAIL AGPAVVSLLA 120
  121 KDKKLHHFAS KHRIRR

Type	Start	End	Confidence
Cytoplasmic	1	8	0.96
Transmembrane Helix	9	31	0.89
Non-Cytoplasmic	32	36	0.76
Transmembrane Helix	37	58	0.91
Cytoplasmic	59	75	0.90
Transmembrane Helix	76	93	0.93
Non-Cytoplasmic	94	99	0.78
Transmembrane Helix	100	120	0.94
Cytoplasmic	121	136	0.96