YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|214001899
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHSWLRLVA GATLSFVIAG HALADEGKIT VFAAASLTNA MQDIAAEYKK EKNVDVVSSF  60
   61 ASSSTLARQI EAGAPADLFI SADQKWMDYA ADKKAVDTTT RETLLGNSLV VVAPKASEQK 120
  121 PFTIDNKTDW IHLLNGGRLA VGDPQHVPAG IYAKEALQKL GAWQTLEPKL APGEDVRGAL 180
  181 ALVERNEAPL GIVYGSDAVA SKGVNVVATF PEDSHKKVEY PIAIVEGHKN AAVSAFYDYL 240
  241 KGPQASAIFK RYGFTTK

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	257	0.99