YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16418925, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILPRHKDV AKSRLNLRNP WHLLATGFGS GLSPVVPGTM GSLAAIPFWY LMTFLPWQLY  60
   61 SLVVMFGICI GVYLCHQTAK DMGVHDHGSI VWDEFIGMWI TLMALPTTDW QWVAAGFVIF 120
  121 RILDMWKPWP IRWFDRNVHG GMGIMIDDIV AGVISAGILY FIGHHWPLGI I

Type	Start	End	Confidence
Cytoplasmic	1	20	0.92
Transmembrane Helix	21	45	0.88
Non-Cytoplasmic	46	55	0.75
Transmembrane Helix	56	76	0.91
Cytoplasmic	77	94	0.71
Transmembrane Helix	95	120	0.76
Non-Cytoplasmic	121	142	0.59
Transmembrane Helix	143	164	0.89
Cytoplasmic	165	171	0.52