YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lcl\|NC_016856.1_...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIAFFLAM LLMPCVSFAG LLSSSSPVTP VSKEYKQQLM GSPVYIQIFK EERTLDLYVK  60
   61 MGEQYQLLDS YKICNYSGGL GPKRRQGDFK SPEGFYSVQR NQLKPDSRFY KAINIGFPNA 120
  121 YDRAHGYDGK YLMIHGACVS VGCYAMTDSG IDEIFQFVTA ALVFGQPSVQ VSIYPFRMTD 180
  181 ANMQRHKYSY YKDFWAQLKP GYDYFEQTHK PPTVSIVDGR YVVSKPLSHE VVQPQLASNY 240
  241 TLSEAK

Type	Start	End	Confidence
Signal Peptide	1	25	0.90
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	246	0.99