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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|213646661
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMKKLLIAS LLFSSATVYG AEGFVVKDIH FEGLQRVAVG AALLSMPVRT GDTVNDEDIS  60
   61 NTIRALFATG NFEDVRVLRD GNTLLVQVKE RPTIASITFS GNKSVKDDML KQNLEASGVR 120
  121 VGESLDRTTL SDIEKGLEDF YYSVGKYSAS VKAVVTPLPR NRVDLKLVFQ EGVSAKIQQI 180
  181 NIVGNHAFST EELISHFQLR DEVPWWNVVG DRKYQKQKLA GDLETLRSYY LDRGYARFNI 240
  241 DSTQVSLTPD KKGIYITVNI TEGDQYKLSG VQVSGNLAGH SAEIEKLTKI EPGELYNGTK 300
  301 VTKMEDDIKK LLGRYGYAYP RVQSQPEIND ADKTVKLRVN VDAGNRFYVR KIRFEGNDTS 360
  361 KDSVLRREMR QMEGAWLGSD LVDQGKERLN RLGFFETVDT DTQRVPGSPD QVDVVYKVKE 420
  421 RNTGSFNFGI GYGTESGVSF QAGVQQDNWL GTGYSVGING TKNDYQTYSE LSVTNPYFTV 480
  481 DGVSLGGRIF YNDFEADDAD LSDYTNKSYG TDVTLGFPIN EYNTLRAGLG YVHNKLSNMQ 540
  541 PQIAMDRYLE SMGDPDASDF AADDFTFNYG WTYNKLDRGY FPTDGSRVNL TGKVTIPGSD 600
  601 NEYYKVSLDT ATYVPIDNDH KWVVLGRTRW GYGDGLGGKE MPFYENFYAG GSSTVRGFQS 660
  661 NTIGPKAVYK NGAHTSWDDD DDYEDCTQES GCKSDDAVGG NAMAVASLEF ITPTPFISEK 720
  721 YANSVRTSFF WDMGTVWDTN WDPSSAPSDV PDYSDPGNIR MSAGIALQWM SPLGPLVFSY 780
  781 AQPFKKYDGD KAEQFQFNIG KTW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle